Lineage short_Lineage lefse_pValue lefse_LDA carcinoma normal logFC lefse_selected_feature Abiotrophia Abiotrophia 1 0 17 47 -1.415037499278844 N.S. Acetanaerobacterium Acetanaerobacterium 0.0970595 2.39437 3818 1899 1.0071955014042029 N.S. Acetatifactor Acetatifactor 1 0 47 49 -0.05889368905356829 N.S. Acetitomaculum Acetitomaculum 0.45492 -1.7742 239 2063 -3.1043366598147353 N.S. Acetivibrio Acetivibrio 0.205904 0 34704 33447 0.053223580463072295 N.S. Acidaminobacter Acidaminobacter 1 0 0 217 -7.768184324776926 N.S. Acidaminococcus Acidaminococcus 0.39495199999999997 -3.58596 1510 37506 -4.633584307935612 N.S. Acinetobacter Acinetobacter 0.171839 -1.77039 899 1581 -0.8137526932557542 N.S. Actinobaculum Actinobaculum 1 0 48 258 -2.4020984435713464 N.S. Actinomyces Actinomyces 0.492946 0 3232 3680 -0.18722424225797596 N.S. Adlercreutzia Adlercreutzia 0.32966599999999996 -2.70734 5205 10105 -0.9569648682138396 N.S. Aerococcus Aerococcus 1 0 5 6 -0.2223924213364481 N.S. Aestuariispira Aestuariispira 1 0 321 604 -0.9098744540473387 N.S. Akkermansia Akkermansia 0.191376 4.27127 311872 279201 0.15964938266622042 N.S. Alistipes Alistipes 0.30968999999999997 3.2563 191151 211055 -0.14290554850367698 N.S. Alkalibacter Alkalibacter 1 0 0 56 -5.832890014164741 N.S. Alkaliphilus Alkaliphilus 0.206499 0 12635 25137 -0.992330030120236 N.S. Allisonella Allisonella 0.00139074 -1.7731 0 693 -9.43879185257826 normal Allobaculum Allobaculum 1 0 3 7 -1 N.S. Alloprevotella Alloprevotella 1 0 33 71 -1.082462160191973 N.S. Alloscardovia Alloscardovia 1 0 19 31 -0.6780719051126374 N.S. Anaerobacterium Anaerobacterium 0.379561 1.60704 832 126 2.713487998593383 N.S. Anaerococcus Anaerococcus 1 0 196 34 2.49276880251141 N.S. Anaerofilum Anaerofilum 0.138429 0 444 1852 -2.0579856401735057 N.S. Anaerofustis Anaerofustis 0.28396 -1.56443 63 300 -2.2336196767597016 N.S. Anaeroglobus Anaeroglobus 1 0 0 5 -2.584962500721156 N.S. Anaeroplasma Anaeroplasma 1 0 6 0 2.807354922057604 N.S. Anaerorhabdus Anaerorhabdus 0.209622 1.82443 825 233 1.8196332518360414 N.S. Anaerosinus Anaerosinus 1 0 111 747 -2.7395395378300336 N.S. Anaerosporobacter Anaerosporobacter 1 0 2236 2372 -0.08514684413482954 N.S. Anaerostipes Anaerostipes 0.216789 0.512559 71547 67295 0.0883906843005775 N.S. Anaerotruncus Anaerotruncus 1 0 1716 2388 -0.47651681445419847 N.S. Anaerovibrio Anaerovibrio 1 0 149 61 1.2746223801090055 N.S. Anaerovorax Anaerovorax 0.110295 -2.35843 3347 6492 -0.9555856814768333 N.S. Atopobium Atopobium 1 0 22 65 -1.5208321633014403 N.S. Bacillus Bacillus 0.38209699999999996 1.57865 1554 2357 -0.6006491379617973 N.S. Bacteroides Bacteroides 5.34435e-4 3.60401 1249468 1914293 -0.6154973101738932 N.S. Barnesiella Barnesiella 0.30968999999999997 3.53822 74130 47483 0.6426355018016547 N.S. Bifidobacterium Bifidobacterium 1 0 47267 118759 -1.3291132705388193 N.S. Bilophila Bilophila 1 0 14385 15229 -0.08225043260776133 N.S. Blautia Blautia 0.0712069 4.18582 559666 340255 0.7179480815765302 N.S. Brassicibacter Brassicibacter 1 0 11 1966 -7.356818741557374 N.S. Brevibacterium Brevibacterium 1 0 0 27 -4.807354922057604 N.S. Bulleidia Bulleidia 1 0 82 0 6.3750394313469245 N.S. Buttiauxella Buttiauxella 0.0779243 2.88761 8827 811 3.4425349970944374 N.S. Butyricicoccus Butyricicoccus 1 0 10950 8897 0.2995096131561308 N.S. Butyricimonas Butyricimonas 0.34587599999999996 0 1585 5947 -1.9070118763484398 N.S. Butyrivibrio Butyrivibrio 1 0 3733 5265 -0.49598559381986007 N.S. Caldicellulosiruptor Caldicellulosiruptor 1 0 619 1007 -0.7011555182256775 N.S. Caloramator Caloramator 0.41246799999999995 0 194 514 -1.4010983083209698 N.S. Campylobacter Campylobacter 1 0 1649 68 4.579725852355009 N.S. Catabacter Catabacter 1 0 205 371 -0.8526582839248125 N.S. Catenibacterium Catenibacterium 0.46467899999999995 2.75761 3505 35 6.6056852793172265 N.S. Catenisphaera Catenisphaera 1 0 0 10 -3.4594316186372973 N.S. Cellulosibacter Cellulosibacter 0.347881 -2.55523 5199 8636 -0.7320186663687753 N.S. Cetobacterium Cetobacterium 1 0 304 0 8.252665432450248 N.S. Christensenella Christensenella 0.164572 -2.02928 505 1385 -1.4537179674429037 N.S. Cloacibacillus Cloacibacillus 1 0 991 255 1.954196310386875 N.S. Clostridium_iii Clostridium_iii 0.0950759 2.67029 26667 29391 -0.1403138993343216 N.S. Clostridium_iv Clostridium_iv 0.254032 0 103467 106065 -0.035777618953606094 N.S. Clostridium_sensu_stricto Clostridium_sensu_st 0.0363237 2.7542 56934 41231 0.46555135965766503 N.S. Clostridium_xi Clostridium_xi 0.34587599999999996 -1.40684 127 303 -1.2479275134435852 N.S. Clostridium_xii Clostridium_xii 1 0 446 961 -1.1057620625867237 N.S. Clostridium_xlva Clostridium_xlva 0.0107461 2.24346 110100 183533 -0.7372197773097682 N.S. Clostridium_xlvb Clostridium_xlvb 0.0512277 3.15487 25603 7802 1.7142684086015265 N.S. Clostridium_xviii Clostridium_xviii 0.00379153 0 13838 40345 -1.5436859500805955 normal Collinsella Collinsella 1 0 54152 33636 0.6869922223587466 N.S. Comamonas Comamonas 0.127646 -0.612436 17 27 -0.6374299206152916 N.S. Coprobacillus Coprobacillus 0.139263 -2.14357 117 1047 -3.1507799521756086 N.S. Coprobacter Coprobacter 0.221083 2.52905 6558 4784 0.45495695034340145 N.S. Coprococcus Coprococcus 0.0537709 0 34397 112831 -1.7137796949004134 N.S. Corynebacterium Corynebacterium 0.31758099999999995 0 67 62 0.11018291775042233 N.S. Defluviitalea Defluviitalea 1 0 255 463 -0.8579809951275728 N.S. Deinococcus Deinococcus 1 0 2165 2900 -0.421517052589671 N.S. Dendrosporobacter Dendrosporobacter 0.177672 -3.72788 4119 58456 -3.8266595497398566 N.S. Desulfitibacter Desulfitibacter 1 0 230 228 0.012545253319113492 N.S. Desulfomicrobium Desulfomicrobium 1 0 4 2549 -8.994353436858859 N.S. Desulfotomaculum Desulfotomaculum 0.224164 1.32126 202 76 1.3985493764902754 N.S. Desulfovibrio Desulfovibrio 1 0 8329 2852 1.5458367486711904 N.S. Dethiobacter Dethiobacter 1 0 943 772 0.2883184454369925 N.S. Dialister Dialister 0.300647 0 16783 66923 -1.9954370937845258 N.S. Dietzia Dietzia 1 0 6 7 -0.19264507794239583 N.S. Dorea Dorea 0.10136200000000001 2.56788 44760 26096 0.7783582974990075 N.S. Eggerthella Eggerthella 1 0 3040 1499 1.0195833156475551 N.S. Eggerthia Eggerthia 0.161586 -1.12779 44 260 -2.53605290024021 N.S. Eikenella Eikenella 0.014503499999999999 0.648982 52 10 2.2684888359259014 carcinoma Eisenbergiella Eisenbergiella 1 0 16 21 -0.3719687773869582 N.S. Enterococcus Enterococcus 0.07185470000000001 0 3679 30594 -3.0555182277777444 N.S. Enterorhabdus Enterorhabdus 0.471514 -2.17277 1472 4231 -1.5225821970781777 N.S. Erysipelotrichaceae_incertae_sedis Erysipelotrichaceae_ 1 0 3363 2306 0.5441597015721609 N.S. Escherichia_shigella Escherichia_shigella 0.164759 4.18381 212682 45067 2.238529388058655 N.S. Ethanoligenens Ethanoligenens 0.0889503 -2.12163 838 6792 -3.0173061384085393 N.S. Eubacterium Eubacterium 0.0488365 2.58441 38131 153085 -2.005268245089411 normal Ezakiella Ezakiella 1 0 11 10 0.12553088208385876 N.S. Faecalibacterium Faecalibacterium 1 0 189372 287577 -0.6027226602863927 N.S. Faecalicoccus Faecalicoccus 1 0 358 96 1.8879271916359235 N.S. Faecalitalea Faecalitalea 1 0 394 214 0.8775159934750052 N.S. Falsiporphyromonas Falsiporphyromonas 0.206499 -0.692017 8 16 -0.917537839808027 N.S. Filifactor Filifactor 1 0 123 23 2.369233809665719 N.S. Finegoldia Finegoldia 1 0 38 16 1.1979393776119096 N.S. Flaviflexus Flaviflexus 1 0 0 9 -3.321928094887362 N.S. Flavonifractor Flavonifractor 0.395163 2.46634 10970 12570 -0.19640438555540918 N.S. Fusibacter Fusibacter 1 0 18 125 -2.7293524100563316 N.S. Fusicatenibacter Fusicatenibacter 1 0 51749 44101 0.2307147799662328 N.S. Fusobacterium Fusobacterium 0.0025741600000000003 4.70844 537356 3798 7.144117357424342 carcinoma Gemella Gemella 1 0 716 243 1.5550919711390172 N.S. Gemmiger Gemmiger 1 0 84005 77923 0.10842463801724378 N.S. Geosporobacter Geosporobacter 0.0442771 -3.90425 164 83006 -8.97462316970843 normal Gordonibacter Gordonibacter 1 0 275 513 -0.8971000924157106 N.S. Gp5_Genus Gp5_Genus 1 0 0 14 -3.9068905956085187 N.S. Gpiia_Genus Gpiia_Genus 1 0 1332 0 10.380461065088973 N.S. Gracilibacter Gracilibacter 0.16212000000000001 -1.84035 596 1278 -1.0992134276168315 N.S. Guggenheimella Guggenheimella 1 0 0 2239 -11.129283016944967 N.S. Haemophilus Haemophilus 0.156136 -0.69917 4811 15914 -1.7256786093472076 N.S. Hathewaya Hathewaya 1 0 32 17 0.8744691179161412 N.S. Helicobacter Helicobacter 1 0 15 81 -2.357552004618084 N.S. Hespellia Hespellia 1 0 1690 11985 -2.8254017141604457 N.S. Holdemanella Holdemanella 6.35076e-5 -3.01733 5 16194 -11.398298346961393 normal Holdemania Holdemania 1 0 1033 1202 -0.21840045686114173 N.S. Howardella Howardella 0.467302 -2.0856 1288 2167 -0.7501124929922192 N.S. Hungatella Hungatella 1 0 12557 11506 0.12609496121731212 N.S. Hydrogenibacillus Hydrogenibacillus 1 0 59 5 3.3219280948873626 N.S. Hydrogenispora Hydrogenispora 1 0 40 171 -2.068712750084014 N.S. Hydrogenoanaerobacterium Hydrogenoanaerobacte 1 0 419 355 0.2385120866997248 N.S. Insolitispirillum Insolitispirillum 1 0 0 8451 -13.04507705193494 N.S. Intestinibacter Intestinibacter 0.49390999999999996 -3.13998 36470 33140 0.1381326222897883 N.S. Intestinimonas Intestinimonas 1 0 8075 10143 -0.3289138348079348 N.S. Jeotgalicoccus Jeotgalicoccus 1 0 0 9 -3.321928094887362 N.S. Jonquetella Jonquetella 1 0 0 983 -9.94251450533924 N.S. Lachnoanaerobaculum Lachnoanaerobaculum 1 0 5 0 2.584962500721156 N.S. Lachnobacterium Lachnobacterium 0.0779574 -3.3537 7048 50533 -2.8417638699508316 N.S. Lachnospira Lachnospira 0.108908 0.903961 151 182 -0.26777232484045754 N.S. Lachnospiracea_incertae_sedis Lachnospiracea_incer 0.0712069 3.65861 168817 153707 0.13527648317790764 N.S. Lactivibrio Lactivibrio 1 0 139 174 -0.3219280948873626 N.S. Lactobacillus Lactobacillus 0.271196 1.83443 2101 1313 0.6777973936398478 N.S. Lactococcus Lactococcus 1 0 691 1684 -1.283904648432495 N.S. Lactonifactor Lactonifactor 0.350956 3.53175 33100 5792 2.5144922322046472 N.S. Leuconostoc Leuconostoc 1 0 86 44 0.9510903995190532 N.S. Listeria Listeria 0.41237799999999997 1.60616 1018 1368 -0.4259683950920863 N.S. Lutispora Lutispora 1 0 1767 1262 0.48526363560387864 N.S. Marinococcus Marinococcus 1 0 38 46 -0.2691866328153889 N.S. Marvinbryantia Marvinbryantia 0.180376 0.896718 133 68 0.9575647336796029 N.S. Megasphaera Megasphaera 5.555170000000001e-4 -1.01734 14 6738 -8.811428214870741 normal Melghirimyces Melghirimyces 0.45706699999999995 -1.52893 304 732 -1.2650039556835626 N.S. Mesoplasma Mesoplasma 1 0 0 7 -3 N.S. Methanobrevibacter Methanobrevibacter 0.26273799999999997 3.49736 86926 37674 1.2061968437667119 N.S. Methanosphaera Methanosphaera 1 0 5 0 2.584962500721156 N.S. Micrococcus Micrococcus 1 0 19 16 0.23446525363702353 N.S. Mobiluncus Mobiluncus 1 0 0 31 -5 N.S. Mogibacterium Mogibacterium 0.12456 1.55752 2155 2112 0.029064410817564834 N.S. Morganella Morganella 0.44413199999999997 1.13963 160 17 3.1609918766723046 N.S. Moryella Moryella 1 0 10 9 0.13750352374993513 N.S. Murdochiella Murdochiella 1 0 0 20 -4.392317422778761 N.S. Murimonas Murimonas 1 0 22 16 0.43609911480667396 N.S. Natranaerovirga_hydrolytica Natranaerovirga_hydr 0.122951 -1.91805 151 920 -2.599129832647751 N.S. Natranaerovirga_pectinivora Natranaerovirga_pect 0.212922 -2.09464 305 6091 -4.315312383794641 N.S. Neisseria Neisseria 0.428874 -1.92804 1214 2129 -0.809897116620057 N.S. Nitrosomonas Nitrosomonas 0.22281600000000001 -0.806871 8 4932 -9.09832457055218 N.S. Obesumbacterium Obesumbacterium 1 0 750 551 0.4441446407361038 N.S. Odoribacter Odoribacter 0.245577 0 9100 22661 -1.3161782099815635 N.S. Olsenella Olsenella 1 0 364 777 -1.0918736912188134 N.S. Oribacterium Oribacterium 0.442177 0 553 2364 -2.093882302177569 N.S. Oscillibacter Oscillibacter 1 0 66034 79103 -0.26051976111844866 N.S. Oxalobacter Oxalobacter 1 0 481 368 0.3854123301695651 N.S. Oxobacter Oxobacter 0.119419 -0.811847 171 453 -1.4002837325888162 N.S. Paenibacillus Paenibacillus 1 0 59 87 -0.5525410230287786 N.S. Papillibacter Papillibacter 1 0 1262 611 1.0452510810949018 N.S. Parabacteroides Parabacteroides 0.085156 2.89524 73306 128000 -0.8041322099186061 N.S. Paraeggerthella Paraeggerthella 0.0476152 0.753135 2525 646 1.9650170217950453 carcinoma Parapedobacter Parapedobacter 1 0 18 238 -3.6529392945371635 N.S. Paraprevotella Paraprevotella 0.0456608 2.8917 46890 51 9.816583707787572 carcinoma Parascardovia Parascardovia 1 0 24 23 0.05889368905356829 N.S. Parasutterella Parasutterella 0.236182 0 15891 35803 -1.1718200749228842 N.S. Parvibacter Parvibacter 0.33107899999999996 -2.66237 279 3037 -3.439623137557117 N.S. Parvimonas Parvimonas 0.0282166 2.71972 4590 50 6.4921673747408715 carcinoma Pedobacter Pedobacter 1 0 12 186 -3.8464547417465442 N.S. Peptococcus Peptococcus 0.25105799999999995 2.24698 1605 156 3.354635428625687 N.S. Peptoniphilus Peptoniphilus 1 0 602 65 3.191620072541631 N.S. Peptostreptococcus Peptostreptococcus 1 0 119 40 1.549338590990435 N.S. Phascolarctobacterium Phascolarctobacteriu 0.191376 3.62637 134917 114042 0.2425049411454836 N.S. Porphyromonas Porphyromonas 0.00723808 3.96901 84962 1613 5.718122224135847 carcinoma Prevotella Prevotella 0.00195668 1.80111 188614 155212 0.28119501713260675 N.S. Propionibacterium Propionibacterium 1 0 92 188 -1.0230836131130419 N.S. Proteinivorax Proteinivorax 1 0 22 208 -3.1837971760238695 N.S. Proteus Proteus 0.240117 0.663787 48 11 2.0297473433940523 N.S. Pseudobutyrivibrio Pseudobutyrivibrio 0.455422 -2.20989 471 2444 -2.372975700477756 N.S. Pseudoflavonifractor Pseudoflavonifractor 1 0 3409 4323 -0.3425947838231149 N.S. Pseudomonas Pseudomonas 1 0 1328 1982 -0.5773435729526746 N.S. Pseudoteredinibacter Pseudoteredinibacter 1 0 0 2007 -10.971543553950772 N.S. Rhodobacter Rhodobacter 0.134052 -1.47927 432 766 -0.8248595527762088 N.S. Rikenella Rikenella 1 0 12 7 0.7004397181410922 N.S. Robinsoniella Robinsoniella 0.174961 -3.38798 2820 19684 -2.8028181414608326 N.S. Romboutsia Romboutsia 1 0 23387 21092 0.1490041961143902 N.S. Roseburia Roseburia 0.205904 3.55912 205518 216803 -0.07711959883226527 N.S. Rothia Rothia 0.214908 1.10099 418 290 0.5259310907910688 N.S. Ruminococcus Ruminococcus 0.152507 0 108329 169709 -0.6476387506951333 N.S. Ruminococcus2 Ruminococcus2 0.0712069 4.0576 187962 159425 0.23756176876221602 N.S. Saccharibacteria_genera_incertae_sedis_Genus Saccharibacteria_gen 1 0 36 41 -0.18286405714981058 N.S. Scardovia Scardovia 1 0 17 31 -0.8300749985576878 N.S. Sedimentibacter Sedimentibacter 1 0 0 5 -2.584962500721156 N.S. Selenomonas Selenomonas 1 0 400 5 6.062495925733764 N.S. Senegalimassilia Senegalimassilia 1 0 518 1042 -1.0069327141618842 N.S. Slackia Slackia 1 0 1033 8874 -3.1015109338518343 N.S. Solobacterium Solobacterium 1 0 236 17 3.718818247455947 N.S. Spiroplasma Spiroplasma 0.0439581 -3.15581 1403 10572 -2.912769946659493 normal Sporobacter Sporobacter 1 0 15256 18724 -0.29549440727257625 N.S. Staphylococcus Staphylococcus 0.057575100000000004 1.93244 3210 4284 -0.41627253927409136 N.S. Stomatobaculum Stomatobaculum 1 0 18 0 4.247927513443585 N.S. Streptococcus Streptococcus 0.10136200000000001 0.964099 52911 50176 0.07656873367107764 N.S. Streptomyces Streptomyces 1 0 18 10 0.7884958948062879 N.S. Streptophyta_Genus Streptophyta_Genus 0.0761052 -1.07666 281 1258 -2.158511215320223 N.S. Subdoligranulum Subdoligranulum 1 0 12514 9042 0.46878492221940604 N.S. Succiniclasticum Succiniclasticum 1 0 3262 109 4.890623558567205 N.S. Succinivibrio Succinivibrio 1 0 11 6 0.7776075786635519 N.S. Sutterella Sutterella 1 0 1453 517 1.4890032662330395 N.S. Syntrophococcus Syntrophococcus 0.00173676 1.4534 293 68 2.0911478880581944 carcinoma Terrisporobacter Terrisporobacter 0.110256 -3.55978 1528 33620 -4.458702323934212 N.S. Tindallia Tindallia 0.101232 -1.12441 8 102 -3.5165755257409064 N.S. Tissierella Tissierella 1 0 0 68 -6.108524456778169 N.S. Turicibacter Turicibacter 1 0 3445 12966 -1.9118501346142356 N.S. Vallitalea_guaymasensis Vallitalea_guaymasen 0.262785 -2.44034 411 2672 -2.69774359505986 N.S. Vallitalea_pronyensis Vallitalea_pronyensi 0.127646 -2.56629 3627 15888 -2.1307819682108757 N.S. Vampirovibrio Vampirovibrio 1 0 1985 135 3.8681870662780344 N.S. Varibaculum Varibaculum 1 0 0 99 -6.643856189774724 N.S. Variovorax Variovorax 1 0 54 26 1.0264722113611917 N.S. Veillonella Veillonella 0.14091 0 1435 16421 -3.5155021862630615 N.S. Weissella Weissella 1 0 16 310 -4.193307928880264 N.S.